Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002436.1 Hibiscus syriacus cultivar Beakdansim tig00004988_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64244

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2949--2973
12
2.1
12
100
0
50
44
32
8
16
1.76
14242--14315
29
2.6
29
95
2
132
18
20
16
44
1.87
14331--14366
12
3.0
12
91
0
63
36
25
5
33
1.79
14382--14432
27
2.0
25
82
14
61
37
17
7
37
1.79
14674--14815
64
2.2
64
81
5
153
25
17
23
33
1.96
14910--14986
21
3.7
21
100
0
154
27
20
23
28
1.99
21294--21367
29
2.6
29
97
2
141
18
21
16
43
1.88
21383--21418
12
3.0
12
100
0
72
33
25
8
33
1.86
21726--21902
64
2.8
64
83
5
214
25
20
22
31
1.98
21789--21950
64
2.5
63
86
5
202
25
22
20
30
1.98
28553--28812
135
1.9
135
95
0
466
44
8
13
33
1.74
33720--33769
15
3.3
15
81
10
57
2
42
0
56
1.11
35500--35546
17
2.7
17
80
9
51
51
6
0
42
1.27
49359--49391
7
4.7
7
85
14
50
30
0
0
69
0.88
49621--49654
17
2.0
17
100
0
68
47
17
5
29
1.71
49781--49827
2
23.5
2
100
0
94
51
0
0
48
1.00
52848--52893
23
2.0
23
95
0
83
41
8
30
19
1.82
52858--52902
23
2.0
23
82
4
56
51
8
28
11
1.68
54993--55051
25
2.4
25
81
18
79
50
0
1
47
1.11
55025--55089
16
4.2
16
71
24
52
63
1
0
35
1.04

Tables:   1

The End!