Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002447.1 Hibiscus syriacus cultivar Beakdansim tig00005017_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62355

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1874--2199
54
5.9
54
84
5
361
27
16
21
34
1.95
1881--2199
162
1.9
163
84
6
419
27
16
21
34
1.95
2095--2217
61
2.0
62
82
4
151
28
15
21
34
1.94
2569--2623
22
2.5
22
88
5
76
30
21
14
32
1.93
2665--2714
20
2.5
20
90
6
75
24
28
12
36
1.91
10692--10735
23
1.9
23
85
0
61
22
11
25
40
1.87
20352--20376
12
2.1
12
100
0
50
28
16
8
48
1.74
23307--23353
20
2.3
20
100
0
94
57
21
4
17
1.56
29944--29972
13
2.2
13
100
0
58
6
62
31
0
1.22
30696--30845
3
49.0
3
88
4
210
61
2
0
36
1.12
31097--31772
114
5.8
114
89
5
1000
28
20
13
37
1.91
31097--31772
233
2.9
233
94
1
1166
28
20
13
37
1.91
32412--33274
51
16.8
51
98
0
1627
37
23
14
24
1.92
34220--34255
1
36.0
1
88
0
54
0
5
0
94
0.31
44810--44846
15
2.7
15
88
12
53
62
8
5
24
1.44
46187--46215
13
2.2
13
100
0
58
6
62
31
0
1.22
46936--47091
3
51.0
3
88
3
231
62
1
0
35
1.11
52212--52252
18
2.3
18
91
4
66
63
2
4
29
1.28
58526--58572
23
2.0
24
84
12
62
59
8
2
29
1.39
61451--61491
8
5.2
8
82
5
57
34
0
29
36
1.58
61564--62355
128
6.2
128
89
2
1224
22
25
20
30
1.98
61569--62351
256
3.1
256
95
1
1418
22
25
20
30
1.98

Tables:   1

The End!