Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002450.1 Hibiscus syriacus cultivar Beakdansim tig00005020_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54656

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2684--2726
17
2.6
17
81
3
52
46
4
25
23
1.71
5221--5278
20
2.7
20
81
10
62
32
18
20
27
1.97
10613--10646
16
2.1
17
88
5
52
29
5
5
58
1.45
16048--16103
3
20.0
3
82
14
75
35
0
0
64
0.94
17412--17454
3
14.7
3
86
13
63
27
0
0
72
0.85
21106--21573
203
2.3
202
81
4
498
33
18
19
28
1.95
22149--22187
2
19.5
2
94
0
69
48
0
2
48
1.15
23189--23228
21
1.9
21
85
10
55
47
17
12
22
1.81
24484--24546
3
22.0
3
87
9
96
34
0
0
65
0.93
25116--25154
20
2.0
20
89
0
60
33
10
23
33
1.88
26553--26593
21
2.0
20
86
9
57
26
24
0
48
1.51
28870--28905
13
2.8
13
95
0
63
36
27
22
13
1.92
30702--30729
12
2.3
12
100
0
56
32
17
25
25
1.97
34077--34109
16
2.1
16
100
0
66
42
24
15
18
1.88
36802--36838
4
9.8
4
91
5
51
27
0
0
72
0.84
42495--42529
4
8.8
4
87
0
52
20
5
0
74
1.02
44285--44315
16
1.9
16
93
0
53
16
6
12
64
1.47

Tables:   1

The End!