Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002452.1 Hibiscus syriacus cultivar Beakdansim tig00005025_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34528

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
464--509
16
2.8
17
83
9
69
73
2
0
23
0.94
472--525
10
5.5
10
82
2
65
70
1
3
24
1.13
529--561
2
17.0
2
93
6
59
48
0
0
51
1.00
568--893
39
8.6
38
84
9
352
44
6
5
43
1.53
7585--7627
20
2.2
20
86
0
59
65
2
0
32
1.06
8767--8838
3
25.0
3
72
13
62
56
0
0
43
0.99
8764--8833
12
6.1
12
80
12
76
52
0
0
47
1.00
9194--9542
73
4.8
73
94
1
601
39
13
17
29
1.88
9194--9542
145
2.4
146
94
0
601
39
13
17
29
1.88
10262--10316
22
2.5
22
93
0
101
38
14
10
36
1.81
11656--11830
76
2.3
76
85
1
217
30
22
17
30
1.96
12767--12829
31
2.0
31
96
0
117
33
12
19
34
1.89
13734--13760
10
2.7
10
100
0
54
0
7
0
92
0.38
19605--19837
121
1.9
121
81
6
278
46
8
7
37
1.62
21598--21784
31
6.0
31
94
1
313
36
22
20
19
1.95
24934--25117
31
6.0
31
89
6
270
36
22
20
20
1.95
28193--28375
30
6.0
31
89
6
277
36
22
20
20
1.95
29750--29836
3
30.0
3
79
11
101
59
0
0
40
0.97

Tables:   1

The End!