Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002455.1 Hibiscus syriacus cultivar Beakdansim tig00005028_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79067

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5328--5353
6
4.3
6
100
0
52
34
0
65
0
0.93
10328--10394
30
2.2
30
94
2
116
41
0
14
43
1.46
10725--10767
22
1.9
23
86
13
63
51
2
0
46
1.13
15367--15429
3
21.0
3
93
0
108
33
3
0
63
1.10
18137--18198
26
2.4
26
100
0
124
30
27
6
35
1.82
28047--28078
3
10.7
3
100
0
64
65
0
0
34
0.93
35225--35263
17
2.3
17
100
0
78
10
5
43
41
1.61
43119--43176
21
2.8
21
89
2
82
44
15
18
20
1.86
43539--43632
20
4.7
20
80
6
100
19
18
18
44
1.87
43539--43632
41
2.3
40
78
7
100
19
18
18
44
1.87
43600--43651
20
2.7
20
82
8
63
19
15
23
42
1.89
54639--54663
12
2.1
12
100
0
50
52
0
0
48
1.00
54680--54705
12
2.2
12
100
0
52
38
0
0
61
0.96

Tables:   1

The End!