Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002458.1 Hibiscus syriacus cultivar Beakdansim tig00005032_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43990

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7743--7776
2
17.0
2
100
0
68
50
0
0
50
1.00
9244--9269
2
13.0
2
100
0
52
50
0
0
50
1.00
10662--10708
17
2.8
17
81
12
60
27
0
2
70
0.99
10708--10736
13
2.1
14
93
6
51
58
0
3
37
1.15
13843--13883
7
5.9
7
83
11
57
14
17
9
58
1.62
20825--20879
22
2.5
22
90
0
92
36
10
12
40
1.79
21326--22880
76
20.5
76
97
0
2905
22
20
21
35
1.96
23011--23068
3
19.0
3
79
10
64
37
1
0
60
1.07
22996--23059
34
1.9
32
90
6
101
37
1
0
60
1.06
22996--23068
34
2.3
32
86
11
98
36
1
0
61
1.05
29297--29353
19
2.9
19
75
14
62
66
1
8
22
1.29
29440--29478
19
2.1
19
85
0
51
71
0
2
25
0.98
29464--29516
22
2.4
22
81
12
63
64
0
3
32
1.12
29747--29794
23
2.0
24
84
11
64
70
0
2
27
0.98
30209--30311
37
2.8
38
86
2
138
32
11
13
42
1.80
31064--32340
106
12.0
106
92
0
1991
22
17
25
34
1.96
33941--33997
15
3.9
14
77
22
64
1
8
7
82
0.91
33948--34014
30
2.3
28
78
14
73
0
13
8
77
0.98
38464--38488
2
12.5
2
100
0
50
52
0
0
48
1.00
39201--39298
37
2.6
37
88
0
133
35
10
13
40
1.78
41317--41394
39
1.9
39
84
7
102
50
0
3
46
1.20
41333--41426
39
2.4
39
80
8
93
52
1
3
43
1.24
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41565--41615
19
2.7
18
75
19
59
56
7
0
35
1.28

Tables:   1

The End!