Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000246.1 Hibiscus syriacus cultivar Beakdansim tig00000433_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74513

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--221
80
2.8
79
89
3
333
30
23
23
22
1.99
5205--5657
80
5.7
80
90
2
664
30
25
21
22
1.98
5205--5657
159
2.8
158
90
2
676
30
25
21
22
1.98
8037--8090
28
1.9
28
96
0
99
35
20
16
27
1.94
43678--43745
2
34.0
2
100
0
136
50
0
0
50
1.00
44861--44903
23
1.9
22
90
4
68
25
0
2
72
0.97
45490--45541
2
26.0
2
100
0
104
50
0
0
50
1.00
46270--46296
13
2.1
13
100
0
54
22
25
14
37
1.93
52157--52190
13
2.6
13
90
9
52
50
5
14
29
1.67
52641--52694
23
2.3
23
87
0
72
24
14
38
22
1.91
58384--58422
20
2.1
19
85
9
53
56
7
0
35
1.28
59501--59556
3
19.0
3
96
3
105
66
0
0
33
0.92
63202--63239
20
1.9
20
94
0
67
26
18
15
39
1.91
63417--63454
20
1.9
20
94
0
67
26
13
15
44
1.83
63997--64038
2
22.0
2
85
9
61
47
0
2
50
1.14
64062--64146
20
4.0
22
71
19
74
31
0
2
65
1.05
64071--64146
21
3.6
22
74
15
79
32
0
2
64
1.07
64694--64744
25
2.0
25
100
0
102
49
7
0
43
1.32
65488--65561
30
2.4
29
86
4
76
33
16
12
37
1.85
66933--67078
73
2.0
73
93
0
247
43
10
9
35
1.73
71232--71272
18
2.2
18
86
4
55
70
4
0
24
1.06
71694--71733
22
1.9
20
85
10
53
25
25
22
27
2.00

Tables:   1

The End!