Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002469.1 Hibiscus syriacus cultivar Beakdansim tig00005049_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84073

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3156--3181
2
13.0
2
100
0
52
50
0
50
0
1.00
5582--5616
18
1.9
18
94
0
61
65
8
2
22
1.34
13044--13270
119
1.9
119
100
0
454
22
17
15
44
1.87
15178--15220
22
2.0
21
86
8
61
23
0
2
74
0.93
21235--21265
6
5.2
6
100
0
62
32
19
0
48
1.49
21264--21302
6
6.5
6
100
0
78
33
51
15
0
1.44
22295--22325
2
15.5
2
100
0
62
48
0
0
51
1.00
23384--23416
12
2.8
12
95
0
57
72
18
0
9
1.10
40664--40721
26
2.3
25
80
11
64
34
1
1
62
1.16
40795--40856
31
2.0
31
83
3
79
24
3
11
61
1.44
42349--42445
49
2.0
49
100
0
194
24
9
10
55
1.63
46789--46828
20
2.1
19
90
4
62
35
7
32
25
1.84
46973--47023
22
2.4
21
86
3
66
45
3
0
50
1.20
47599--47633
18
1.9
18
94
0
61
45
0
5
48
1.26
55547--55601
24
2.3
24
84
9
69
54
14
20
10
1.69
56110--56508
112
3.6
112
94
1
703
47
14
14
24
1.81
56716--56873
70
2.3
70
93
0
262
40
11
15
32
1.83
58344--58437
28
3.2
28
76
19
100
54
4
3
38
1.36
58347--58418
34
2.1
34
89
2
110
59
4
1
34
1.25
58381--58446
27
2.4
27
85
5
80
54
4
3
37
1.36
61874--61956
34
2.5
34
90
3
125
56
0
0
43
0.99
62009--62037
14
2.1
14
93
6
51
51
27
6
13
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62583--62625
22
2.0
22
86
4
61
55
2
11
30
1.48
63212--63251
17
2.3
18
86
4
55
30
2
0
67
1.04
77412--77442
2
15.5
2
100
0
62
48
0
0
51
1.00
77677--77742
12
5.7
11
71
15
53
68
1
3
27
1.13
78355--78385
16
1.9
16
93
0
53
51
0
9
38
1.35
78473--78512
2
21.0
2
90
10
66
50
0
0
50
1.00
82787--82815
2
15.0
2
92
7
51
51
0
0
48
1.00

Tables:   1

The End!