Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002476.1 Hibiscus syriacus cultivar Beakdansim tig00005058_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137035

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6487--6531
2
22.5
2
100
0
90
48
0
0
51
1.00
22974--23005
6
5.3
6
100
0
64
0
34
18
46
1.49
30448--30638
97
2.0
95
87
4
276
34
10
18
36
1.86
31909--31966
30
1.9
30
93
6
100
51
17
12
18
1.75
35813--36382
283
2.0
284
85
5
778
24
19
20
34
1.96
42773--42811
2
19.5
2
100
0
78
48
0
0
51
1.00
44166--44212
21
2.2
21
92
0
76
21
38
34
6
1.79
46532--46556
11
2.3
11
100
0
50
24
0
32
44
1.54
56914--56943
11
2.7
11
94
0
51
33
10
0
56
1.32
62758--62787
15
1.9
16
93
6
53
6
16
36
40
1.75
63420--63468
24
2.0
24
92
0
80
20
30
4
44
1.70
63576--63607
16
2.0
16
100
0
64
37
25
12
25
1.91
66047--66122
36
2.1
36
85
7
100
50
1
2
46
1.24
66272--66338
20
3.3
20
95
0
116
25
23
4
46
1.71
70086--70114
2
14.5
2
100
0
58
51
0
0
48
1.00
85695--85831
68
2.0
68
94
0
238
30
18
18
31
1.96
87204--87248
2
23.5
2
91
8
76
51
0
0
48
1.00
87824--87860
2
18.5
2
100
0
74
51
0
0
48
1.00
93419--93488
34
2.1
34
94
0
122
34
14
12
38
1.84
96601--96683
41
2.0
41
95
0
148
27
27
27
16
1.97
111519--111549
14
2.2
14
94
0
53
51
6
0
41
1.27
119674--119754
3
27.0
3
92
0
135
65
0
2
32
1.06

Tables:   1

The End!