Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002480.1 Hibiscus syriacus cultivar Beakdansim tig00005065_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63331

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
967--1006
20
2.0
22
85
14
59
60
0
0
40
0.97
945--1016
31
2.3
33
88
7
105
58
1
0
40
1.07
977--1018
17
2.5
17
84
0
57
54
0
0
45
0.99
10758--10855
42
2.4
41
81
6
119
51
5
12
31
1.61
14339--14373
15
2.3
15
90
0
52
17
11
31
40
1.85
26090--26115
5
5.2
5
100
0
52
80
0
19
0
0.71
34910--34957
15
3.2
15
93
0
87
8
12
66
12
1.44
34915--34963
15
3.3
14
83
8
53
12
12
63
12
1.53
34910--34976
30
2.2
30
84
5
82
13
13
62
10
1.54
44073--44114
15
2.9
14
82
6
57
26
7
4
61
1.42
48746--48790
20
2.2
20
88
0
63
37
0
2
60
1.09
48794--48835
17
2.4
18
84
11
61
57
0
4
38
1.20
50288--50313
8
3.2
8
100
0
52
15
0
11
73
1.11
58932--58970
11
3.5
11
82
3
51
56
25
7
10
1.59
58933--58982
23
2.2
23
85
7
66
60
24
4
12
1.49
59102--59227
41
3.3
40
71
22
128
56
19
8
15
1.65
59024--59283
71
3.6
71
87
1
351
56
15
8
19
1.64
62457--62959
250
2.0
251
95
2
915
31
26
11
30
1.92

Tables:   1

The End!