Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002483.1 Hibiscus syriacus cultivar Beakdansim tig00005069_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65560

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1367--1403
19
1.9
19
88
0
56
27
29
24
18
1.98
4861--4909
18
2.7
18
83
0
53
24
20
28
26
1.99
9358--9391
18
1.9
18
88
5
52
5
8
5
79
1.05
11358--11390
6
5.5
6
100
0
66
48
0
0
51
1.00
12581--12612
7
4.6
7
100
0
64
12
43
15
28
1.83
19855--19892
14
2.7
14
87
0
58
60
0
0
39
0.97
23824--24265
140
3.2
136
85
6
565
23
17
22
36
1.95
24376--24728
140
2.6
139
88
2
514
32
24
19
23
1.97
31689--31713
12
2.1
12
100
0
50
44
0
8
48
1.32
37132--37166
18
1.9
18
88
0
52
45
11
31
11
1.76
38754--38780
2
13.5
2
100
0
54
48
0
0
51
1.00
39362--39421
22
2.7
22
92
2
102
51
0
3
45
1.17
40884--40911
2
14.0
2
100
0
56
50
0
0
50
1.00
47725--47756
2
16.0
2
100
0
64
50
0
0
50
1.00
50895--50958
3
21.0
3
84
9
85
62
1
3
32
1.20
54419--54468
23
2.1
24
88
3
75
60
14
14
12
1.60
54451--54489
20
1.9
21
89
5
62
48
12
15
23
1.79
55198--55237
8
5.0
8
82
11
55
77
0
0
22
0.77
55205--55239
14
2.5
13
86
13
52
80
0
0
20
0.72
55907--55933
6
4.5
6
100
0
54
85
0
0
14
0.61

Tables:   1

The End!