Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002489.1 Hibiscus syriacus cultivar Beakdansim tig00005075_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44479

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2483--2518
16
2.3
16
90
4
56
61
0
8
30
1.26
2474--2517
23
1.9
23
85
0
61
63
0
9
27
1.24
9502--9531
14
2.1
15
93
6
53
40
6
0
53
1.27
11940--11977
20
1.9
20
94
0
67
34
31
10
23
1.89
11986--12028
19
2.2
20
87
4
61
23
20
16
39
1.92
12506--12550
20
2.2
20
84
0
54
15
24
15
44
1.85
12515--12554
20
2.0
20
100
0
80
10
20
20
50
1.76
12525--12568
20
2.2
20
83
0
52
13
15
20
50
1.78
14047--14095
21
2.3
21
82
6
64
16
14
34
34
1.89
14129--14187
21
2.8
21
89
0
91
22
11
27
38
1.89
14479--14539
21
2.9
21
83
9
88
22
31
19
26
1.98
14479--14559
42
1.9
42
84
0
108
24
33
17
24
1.96
15669--16066
207
1.9
206
91
3
656
25
8
23
41
1.83
27970--28004
17
2.1
17
88
0
52
14
8
0
77
0.99
28620--28683
24
2.7
24
90
0
101
37
18
15
28
1.92
29615--29710
20
4.8
20
70
19
74
35
14
21
28
1.93
29615--29710
40
2.4
40
84
3
131
35
14
21
28
1.93
30641--30691
26
2.0
26
84
3
68
45
0
0
54
0.99
40765--40824
20
2.8
21
87
7
77
18
26
33
21
1.96

Tables:   1

The End!