Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002493.1 Hibiscus syriacus cultivar Beakdansim tig00005083_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43566

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4614--4675
27
2.2
28
88
5
90
29
16
20
33
1.94
7203--7253
17
3.0
17
97
0
93
41
21
23
13
1.89
10578--10662
19
4.4
19
96
1
152
37
15
10
36
1.82
10871--10933
2
31.5
2
100
0
126
49
0
0
50
1.00
14557--15112
55
10.1
55
90
5
393
28
24
16
30
1.97
14518--15112
110
5.4
110
90
4
884
28
24
16
30
1.97
14518--15112
274
2.2
276
89
3
911
28
24
16
30
1.97
16109--16165
19
2.8
20
79
12
64
14
12
0
73
1.09
16109--16164
28
2.0
29
89
6
89
14
10
0
75
1.06
16118--16177
27
2.2
27
79
5
68
10
13
0
76
1.01
31911--31948
19
2.0
19
89
0
58
36
15
21
26
1.93
35975--36013
20
2.0
20
94
0
69
12
30
30
25
1.93
36358--36386
15
2.0
15
93
6
51
58
13
13
13
1.63
36662--36696
15
2.3
15
100
0
70
14
22
34
28
1.93
42041--42078
20
1.9
20
94
0
67
13
31
31
23
1.93
42417--42445
15
2.0
15
93
6
51
58
13
13
13
1.63
42719--42753
15
2.3
15
95
0
61
17
20
34
28
1.95

Tables:   1

The End!