Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002502.1 Hibiscus syriacus cultivar Beakdansim tig00005099_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67156

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
350--458
55
2.0
55
94
0
191
26
30
19
23
1.98
11238--11272
18
1.9
18
88
11
54
45
5
5
42
1.51
12014--12285
136
2.0
136
100
0
544
36
19
10
33
1.86
16377--16636
130
2.0
130
100
0
520
35
18
8
37
1.81
21835--21903
22
3.1
22
81
8
61
47
1
0
50
1.09
21845--21962
31
3.7
31
74
16
91
44
3
1
50
1.28
51294--51319
2
13.0
2
100
0
52
50
0
0
50
1.00
60395--60431
19
1.9
19
94
0
65
51
5
8
35
1.55
61784--61816
17
2.1
17
88
11
52
36
3
30
30
1.73
63643--63725
40
2.2
36
82
8
94
24
6
2
67
1.25
63779--63820
19
2.3
18
95
4
75
14
7
0
78
0.95
63790--63814
13
1.9
13
100
0
50
16
8
0
76
1.02

Tables:   1

The End!