Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002509.1 Hibiscus syriacus cultivar Beakdansim tig00005109_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63227

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2992--3385
111
3.5
111
91
0
635
37
20
18
23
1.94
5496--5555
28
2.1
28
100
0
120
35
0
13
51
1.41
21873--21917
2
22.5
2
100
0
90
48
0
51
0
1.00
23154--23208
16
3.1
18
74
12
60
23
9
10
56
1.62
23154--23220
35
1.9
35
84
0
89
29
7
10
52
1.63
24033--24064
16
2.0
16
93
0
55
34
6
25
34
1.81
29994--30081
23
3.8
23
74
14
90
19
23
26
30
1.98
30719--30759
21
2.0
21
95
0
73
24
24
26
24
2.00
30759--30790
12
2.7
12
90
0
55
25
21
15
37
1.93
40991--41041
25
2.0
25
85
7
68
29
9
29
31
1.89
52649--52710
23
2.9
21
83
7
81
20
33
25
19
1.96
58569--58649
24
3.5
24
69
23
75
22
22
22
33
1.97
61354--61460
45
2.4
44
83
12
130
30
23
16
28
1.96

Tables:   1

The End!