Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002511.1 Hibiscus syriacus cultivar Beakdansim tig00005111_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64455

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17516--17567
21
2.3
23
80
12
72
32
34
13
19
1.90
19148--19215
29
2.4
27
77
15
66
33
11
5
48
1.64
24594--24645
21
2.3
23
77
12
63
32
32
13
21
1.92
25366--25414
19
2.6
19
93
0
89
22
14
30
32
1.93
34806--34839
14
2.4
14
85
0
50
52
20
11
14
1.73
41973--42027
23
2.4
24
75
6
60
41
21
14
21
1.89
46376--46469
46
2.0
46
100
0
188
38
17
6
38
1.75
48394--48459
33
2.0
33
100
0
132
30
18
15
36
1.91
53316--53360
21
2.1
21
87
0
63
31
28
24
15
1.96
54159--54283
31
4.0
31
92
2
198
20
20
23
36
1.95
59695--59736
21
2.0
21
90
0
66
26
26
16
30
1.97
62976--63023
18
2.7
18
90
6
71
31
27
18
22
1.97

Tables:   1

The End!