Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002513.1 Hibiscus syriacus cultivar Beakdansim tig00005113_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74787

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7407--7535
60
2.1
60
85
1
168
34
20
13
31
1.91
10452--10500
20
2.6
19
77
6
55
18
0
8
73
1.07
25154--25179
12
2.2
12
100
0
52
84
0
15
0
0.62
25470--25496
2
13.5
2
100
0
54
48
0
0
51
1.00
25506--25548
16
2.7
16
89
7
52
30
0
0
69
0.88
26064--26090
2
13.5
2
100
0
54
48
0
51
0
1.00
32356--32393
13
2.9
13
85
11
51
76
0
5
18
0.97
32523--32584
19
3.0
22
72
15
69
72
0
4
22
1.03
32557--32961
201
2.0
199
93
3
688
57
4
7
29
1.48
40638--40702
27
2.4
27
89
0
94
33
27
18
20
1.96
44981--45031
18
2.9
18
88
2
68
27
25
5
41
1.78
49501--49533
10
3.5
10
84
16
52
45
0
0
54
0.99
50629--50750
61
2.0
61
82
3
147
40
4
21
33
1.72
51218--51242
3
8.3
3
100
0
50
32
0
0
68
0.90
51411--51487
29
2.7
29
97
0
145
14
35
27
23
1.93
51548--51587
14
2.9
14
96
0
71
10
30
37
22
1.87
51543--51594
14
3.7
14
82
10
70
9
28
38
23
1.86
52380--52439
30
2.0
30
83
6
77
56
5
1
36
1.31
58487--58512
2
13.0
2
100
0
52
50
0
0
50
1.00
62891--63048
82
2.0
73
88
10
226
21
17
20
40
1.91
64016--64079
26
2.5
26
92
0
101
17
9
15
57
1.63
71259--71303
18
2.4
18
88
7
63
4
28
2
64
1.25

Tables:   1

The End!