Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002516.1 Hibiscus syriacus cultivar Beakdansim tig00005118_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59600

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7852--7881
15
2.0
15
93
0
51
50
13
3
33
1.58
8404--8554
44
3.5
44
69
11
123
27
14
5
51
1.65
8393--8578
85
2.2
86
77
8
191
27
15
8
48
1.73
8472--8804
43
7.8
44
72
12
146
26
17
7
48
1.74
8487--8723
127
1.9
129
84
8
324
25
18
7
48
1.75
8697--8795
41
2.4
43
83
6
123
26
20
8
45
1.78
17084--17160
33
2.4
31
85
6
109
33
9
11
45
1.72
22995--23053
31
1.9
31
85
0
82
42
1
1
54
1.20
22992--23061
31
2.3
31
80
5
79
45
1
2
50
1.25
22957--23167
73
2.9
73
77
10
220
43
2
7
46
1.45
23243--23310
32
2.2
30
84
12
84
52
2
2
41
1.31
23265--23329
32
2.0
34
82
11
82
53
3
1
41
1.25
24530--24591
29
2.1
29
84
3
79
40
9
6
43
1.63
36563--36616
28
1.9
28
100
0
108
55
5
11
27
1.57
52989--53042
28
1.9
28
100
0
108
25
7
16
50
1.71
53587--53664
31
2.5
30
85
2
93
39
12
11
35
1.80
54753--54817
31
2.1
31
94
0
112
40
10
12
36
1.78
58870--58940
29
2.4
29
100
0
142
35
11
7
46
1.67

Tables:   1

The End!