Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002518.1 Hibiscus syriacus cultivar Beakdansim tig00005121_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50741

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3744--3805
31
2.0
32
83
3
81
25
8
8
58
1.55
7727--7804
28
2.8
28
94
0
129
20
24
23
32
1.98
15380--15434
19
2.9
19
94
0
101
29
14
20
36
1.92
36633--36659
2
13.5
2
100
0
54
48
0
0
51
1.00
40045--40083
14
2.8
14
81
11
53
17
25
0
56
1.41
44014--44096
18
4.7
18
70
15
66
54
0
0
45
0.99
44004--44098
35
2.6
38
82
12
119
52
0
0
47
1.00
44039--44108
26
2.6
28
79
16
76
47
0
0
52
1.00
45075--45189
56
2.0
58
80
8
128
46
6
15
32
1.71
46365--46420
16
3.7
16
74
9
55
78
1
5
14
1.00
46801--46868
30
2.3
30
87
10
95
42
8
14
33
1.77
46813--46868
16
3.7
15
81
9
78
42
8
14
33
1.77

Tables:   1

The End!