Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000252.1 Hibiscus syriacus cultivar Beakdansim tig00000460_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76461

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1044--1078
14
2.4
15
90
4
54
60
5
2
31
1.35
5246--5295
20
2.5
20
83
12
66
18
26
24
32
1.97
12520--12558
21
1.9
21
89
5
62
20
25
23
30
1.98
12559--12597
17
2.3
17
100
0
78
17
46
25
10
1.80
12566--12608
22
2.0
22
90
0
68
16
46
25
11
1.80
14810--14850
19
2.2
19
86
8
57
78
0
2
19
0.87
15183--15229
21
2.2
21
100
0
94
23
19
8
48
1.75
25492--25549
22
2.6
22
81
5
64
70
1
1
25
1.06
25499--25566
33
2.0
33
83
13
84
69
2
4
23
1.21
27025--28347
76
17.4
76
96
0
2434
34
21
19
23
1.96
29024--29075
22
2.4
22
96
0
95
40
17
7
34
1.78
33801--33888
26
3.4
26
80
10
99
0
14
0
85
0.60
33799--33885
7
12.7
7
78
11
76
0
13
0
86
0.58
33833--33887
1
55.0
1
85
0
74
0
7
0
92
0.38
33799--33888
10
8.6
10
84
10
92
0
14
0
85
0.60
36699--36727
14
2.1
14
93
6
51
48
10
13
27
1.75
39062--39098
17
2.2
17
86
13
51
72
0
2
24
0.97
39959--40017
11
5.4
10
80
15
55
67
1
3
27
1.16
39959--40017
22
2.7
22
84
5
75
67
1
3
27
1.16
41191--41248
3
20.0
3
78
7
66
62
0
0
37
0.96
41180--41222
16
2.8
16
89
10
63
55
0
0
44
0.99
68146--68271
59
2.1
59
80
2
137
34
16
14
34
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70869--70898
13
2.3
13
94
0
51
26
16
10
46
1.78
71143--71251
37
3.0
37
85
10
163
60
4
9
25
1.46
71150--71252
33
3.0
33
87
7
125
60
3
8
27
1.44

Tables:   1

The End!