Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002521.1 Hibiscus syriacus cultivar Beakdansim tig00005132_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64228

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3395--3430
18
2.0
18
88
0
54
25
8
30
36
1.85
4486--4532
22
2.1
22
100
0
94
21
23
29
25
1.99
6298--6390
4
22.5
4
76
10
89
69
2
4
23
1.17
6283--6386
47
2.2
47
80
8
122
68
1
5
24
1.22
7654--7715
24
2.6
24
78
0
70
11
11
19
58
1.62
8368--8425
10
5.6
10
73
15
55
10
10
20
58
1.60
8373--8421
16
3.1
16
93
0
89
8
12
22
57
1.61
8491--8531
16
2.7
16
85
7
59
12
9
17
60
1.57
8640--8682
19
2.3
19
88
4
61
44
9
23
23
1.82
12176--12251
31
2.5
30
83
10
93
55
5
3
35
1.41
15670--15709
15
2.7
15
88
7
55
65
0
5
30
1.14
15676--15724
15
3.4
14
83
8
53
67
2
2
28
1.13
23391--23485
46
2.1
46
89
0
145
35
3
10
50
1.53
23853--23877
13
1.9
13
100
0
50
8
8
0
84
0.79
25664--25736
36
2.0
36
91
0
119
31
15
5
47
1.67
32860--32914
21
2.6
21
85
0
74
38
7
10
43
1.68
33805--33868
33
1.9
33
90
0
101
35
7
4
51
1.52
35930--36004
31
2.4
31
90
0
123
46
9
13
30
1.74
37346--37387
18
2.3
18
80
8
50
66
19
2
11
1.34

Tables:   1

The End!