Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002530.1 Hibiscus syriacus cultivar Beakdansim tig00005143_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72572

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4467--4522
22
2.5
22
91
0
94
37
25
10
26
1.88
5462--6700
105
12.0
105
88
5
1671
34
24
17
23
1.96
5462--6706
312
4.0
312
88
4
1750
34
24
17
22
1.96
7430--7526
37
2.6
37
86
0
140
40
16
10
32
1.82
7917--8108
94
2.0
94
83
8
242
29
6
2
61
1.31
7955--8148
100
1.9
100
81
8
234
26
8
2
62
1.34
8177--8286
25
4.5
25
68
22
83
29
4
0
65
1.18
9538--9568
16
2.0
16
93
6
55
12
3
6
77
1.08
11586--11704
63
1.9
62
84
5
159
34
18
15
31
1.93
11602--11709
31
3.4
32
73
13
98
37
16
15
30
1.90
13438--13556
22
5.4
22
90
0
184
30
30
24
15
1.95
14256--14293
2
19.0
2
100
0
76
50
0
0
50
1.00
19428--19536
31
3.5
31
78
14
125
34
17
17
30
1.93
20430--20487
20
2.7
20
81
10
62
27
20
18
32
1.97
31867--31922
28
2.0
28
89
6
87
58
0
5
35
1.21
31873--31940
28
2.5
26
84
13
77
55
1
4
38
1.29
32902--32939
15
2.5
16
79
12
53
39
0
0
60
0.97
39522--39559
17
2.2
17
100
0
76
23
28
5
42
1.76
47516--47550
12
2.9
12
91
8
54
57
0
0
42
0.99
49011--49150
3
46.7
3
82
0
172
60
0
5
34
1.21
49016--49148
27
4.9
27
96
0
239
60
0
6
33
1.21
49401--49946
113
4.8
113
89
1
821
28
19
13
38
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50559--50986
82
5.2
82
88
3
655
35
21
13
29
1.91
50559--50986
165
2.6
165
97
0
795
35
21
13
29
1.91
52111--52196
11
8.0
11
73
13
54
3
17
0
79
0.88
52114--52197
20
4.0
21
76
11
73
4
16
0
78
0.91
52113--52194
43
1.9
43
85
5
112
3
15
0
80
0.85
52115--52195
25
3.1
26
77
13
85
3
16
0
80
0.85
57003--57142
70
2.0
70
100
0
280
32
21
14
31
1.93
62879--62920
18
2.4
17
84
11
50
69
4
0
26
1.08
64569--64613
20
2.2
20
88
7
65
0
24
11
64
1.26
65079--65199
3
40.7
3
87
1
172
61
0
4
33
1.15
69223--69285
3
21.0
3
77
6
65
38
0
1
60
1.07
69355--69423
3
22.7
3
79
5
68
36
0
1
62
1.04
69179--69592
138
3.0
138
93
3
670
36
9
5
47
1.60
69493--69566
3
23.7
3
80
2
67
35
0
1
63
1.03
70837--70910
17
4.1
17
71
25
55
25
4
4
66
1.27

Tables:   1

The End!