Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002544.1 Hibiscus syriacus cultivar Beakdansim tig00005166_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75227

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11978--12010
2
16.5
2
100
0
66
48
0
0
51
1.00
25769--26084
36
8.4
36
73
18
179
43
6
2
47
1.43
25767--26014
38
6.3
38
74
20
185
42
5
2
48
1.41
31134--31332
103
1.9
103
97
0
380
33
20
13
32
1.91
36261--36286
10
2.6
10
100
0
52
0
38
0
61
0.96
38757--38783
2
13.5
2
100
0
54
48
0
0
51
1.00
39238--39276
2
20.0
2
94
5
71
51
0
0
48
1.00
39273--39301
14
2.0
15
93
6
51
24
0
0
75
0.80
41544--41600
28
2.0
28
100
0
114
47
10
17
24
1.79
43025--43281
122
2.1
119
79
9
270
26
12
26
34
1.92
48517--48561
20
2.1
22
84
8
58
33
0
0
66
0.92
50158--50250
24
3.7
24
82
12
114
47
0
1
51
1.07
50184--50275
28
3.4
28
80
13
129
42
0
2
55
1.12
50167--50275
52
2.1
53
96
1
202
43
0
1
55
1.10
50271--50332
19
3.3
19
78
15
58
37
1
0
61
1.06
50466--50491
7
3.7
7
100
0
52
73
0
0
26
0.84
57415--57682
146
1.8
145
86
4
387
30
19
23
26
1.98
57691--57732
21
2.1
19
83
16
50
35
4
7
52
1.50
59802--59849
2
24.0
2
100
0
96
50
0
0
50
1.00
60406--60434
14
2.0
15
93
6
51
55
3
6
34
1.44
63659--63808
73
2.1
73
96
0
273
40
16
12
31
1.85

Tables:   1

The End!