Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002553.1 Hibiscus syriacus cultivar Beakdansim tig00005180_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40734

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6938--6986
18
2.7
18
74
0
53
40
4
46
8
1.52
7981--8037
29
2.0
29
96
0
105
38
14
29
17
1.89
11209--11240
3
10.7
3
93
0
55
65
0
3
31
1.08
14356--14398
22
2.0
22
86
4
61
51
0
11
37
1.39
20900--20942
21
2.0
21
86
0
59
30
27
25
16
1.97
20922--21071
66
2.3
67
90
1
230
27
29
26
16
1.97
21371--21442
29
2.5
29
93
0
117
40
9
12
37
1.76
21612--21913
149
2.0
149
97
0
568
26
15
19
37
1.92
21894--21938
23
2.0
23
86
0
63
20
24
28
26
1.99
27972--28012
21
2.0
21
85
0
55
29
29
24
17
1.97
27992--28140
65
2.3
66
89
2
219
27
29
26
16
1.97
28440--28511
29
2.5
29
93
0
117
40
9
12
37
1.76
28961--29005
23
2.0
23
81
0
54
22
24
26
26
2.00
31918--32102
98
1.9
100
86
2
266
42
15
21
20
1.89
34909--34989
7
11.6
7
71
0
63
17
27
48
7
1.73
34912--34989
14
5.6
14
71
0
75
17
26
47
7
1.75
34909--34998
28
3.2
28
93
0
153
18
26
47
6
1.73
37868--37936
36
1.9
36
96
0
129
57
11
5
24
1.55

Tables:   1

The End!