Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002554.1 Hibiscus syriacus cultivar Beakdansim tig00005184_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72856

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2036--2110
21
3.6
21
92
0
114
18
21
21
38
1.93
2989--3055
22
3.0
22
91
2
98
29
13
29
26
1.94
2913--3139
117
1.9
116
82
2
276
32
16
25
26
1.96
3476--4069
54
11.3
54
84
5
768
28
18
20
32
1.96
3481--4069
158
3.7
156
85
5
694
28
18
20
33
1.96
6973--7026
26
2.1
26
89
0
81
37
25
12
24
1.91
10848--10924
3
25.7
3
92
5
129
33
1
0
64
1.01
11957--12006
26
1.9
26
91
0
82
32
28
18
22
1.97
15487--15526
20
2.0
20
95
0
71
42
10
17
30
1.82
22939--22981
2
21.5
2
95
0
77
48
2
0
48
1.14
37297--37371
36
2.1
37
82
7
91
10
28
37
24
1.88
39330--39400
36
2.0
36
88
5
108
15
26
35
22
1.94
39351--39383
13
2.4
14
85
5
50
18
30
30
21
1.97
40855--40905
22
2.3
22
80
6
59
15
27
33
23
1.95
42382--42430
20
2.6
18
80
9
53
18
10
4
67
1.36
49033--49059
13
2.1
13
100
0
54
22
37
7
33
1.82
60111--60239
52
2.5
52
94
0
222
27
29
13
28
1.95
70439--70486
25
2.0
24
84
11
64
20
20
0
58
1.40

Tables:   1

The End!