Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002556.1 Hibiscus syriacus cultivar Beakdansim tig00005187_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51973

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5167--5195
14
2.0
15
93
6
51
62
0
0
37
0.96
8965--9138
87
2.0
87
97
0
330
48
13
12
25
1.76
17203--17333
51
2.6
49
75
12
131
36
9
10
42
1.73
17203--17368
50
3.3
51
75
9
119
36
11
12
39
1.79
17451--17477
7
3.9
7
100
0
54
29
0
0
70
0.88
18531--18575
24
2.0
23
83
12
58
51
0
4
44
1.21
18776--18833
30
2.0
27
83
9
71
41
1
1
55
1.20
19945--20048
29
3.5
29
67
20
72
44
0
1
53
1.11
20186--20336
78
1.9
78
95
0
275
52
2
3
40
1.34
20210--20328
36
3.1
36
64
25
82
53
3
3
39
1.34
20964--21045
41
2.0
42
92
2
139
43
2
7
46
1.44
21148--21232
29
2.9
29
92
0
143
32
14
5
47
1.68
26754--26950
105
1.9
105
84
2
270
25
28
13
32
1.93
29544--29679
67
2.0
67
100
0
272
33
16
10
39
1.82
47004--47046
21
2.0
22
90
4
70
30
18
23
27
1.98
47004--47063
21
2.9
21
80
9
61
28
16
25
30
1.97
50396--50431
18
1.9
19
94
5
65
36
13
22
27
1.92
51269--51312
22
2.0
22
90
0
70
29
20
20
29
1.98
51269--51324
22
2.6
21
86
8
69
26
19
21
32
1.97

Tables:   1

The End!