Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002559.1 Hibiscus syriacus cultivar Beakdansim tig00005193_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55676

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7965--8125
84
1.9
83
97
1
304
24
12
13
49
1.77
11818--11846
14
2.0
15
93
6
51
37
0
0
62
0.96
19454--19522
34
2.1
33
94
2
120
30
27
23
18
1.98
19655--19731
21
3.4
21
71
23
66
62
16
7
12
1.53
21299--21330
7
4.6
7
96
0
55
15
0
15
68
1.21
22080--22121
20
2.1
20
100
0
84
14
23
42
19
1.87
22157--22228
36
2.0
36
91
5
119
15
26
36
22
1.93
22423--22461
20
2.0
19
90
5
60
53
7
0
38
1.30
25876--25915
20
2.0
20
90
4
64
55
7
0
37
1.29
27097--27148
18
2.9
18
85
8
70
40
17
34
7
1.78
27098--27157
18
3.4
17
79
9
66
43
15
33
8
1.76
28620--28819
65
3.1
63
81
11
226
30
23
19
27
1.98
28886--28933
21
2.3
21
100
0
96
29
25
22
22
1.99
37306--37346
21
2.0
21
85
0
55
14
12
9
63
1.52
45493--45532
21
1.9
21
100
0
80
20
0
45
35
1.51
52573--52644
28
2.5
29
86
4
101
33
12
34
19
1.89

Tables:   1

The End!