Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002562.1 Hibiscus syriacus cultivar Beakdansim tig00005201_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67914

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1449--1514
30
2.2
30
81
8
71
37
4
24
33
1.76
6757--6977
64
3.5
64
80
8
206
32
19
19
28
1.96
7715--7937
103
2.2
103
97
0
428
25
12
24
37
1.91
7949--8011
23
2.7
23
90
0
90
20
30
23
25
1.99
12445--12589
64
2.3
64
86
4
186
33
17
20
28
1.95
13356--13574
103
2.1
103
99
0
429
25
13
23
37
1.91
13590--13652
23
2.7
23
92
0
99
17
28
26
26
1.98
16646--16691
22
2.2
21
84
7
58
30
13
26
30
1.93
17187--17668
81
6.0
81
92
0
777
35
10
21
31
1.88
20125--20155
2
15.5
2
100
0
62
51
0
0
48
1.00
22485--23451
81
12.0
81
90
0
1432
36
10
20
32
1.87
24216--24261
20
2.3
20
88
3
67
39
0
21
39
1.54
27181--27213
15
2.3
15
89
5
50
48
6
0
45
1.27
33835--33869
18
1.9
18
100
0
70
40
17
2
40
1.64
40558--40615
25
2.3
25
96
0
107
25
31
15
27
1.96
48417--48442
12
2.2
12
100
0
52
23
0
53
23
1.46
52856--52894
20
2.0
20
90
10
62
25
15
10
48
1.76
58096--58121
12
2.2
12
100
0
52
42
23
15
19
1.89
60085--60141
13
4.4
13
90
0
87
29
22
14
33
1.93
60077--60141
26
2.5
26
84
0
94
29
21
15
33
1.94

Tables:   1

The End!