Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002572.1 Hibiscus syriacus cultivar Beakdansim tig00005215_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  126268

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6268--6304
13
2.8
14
84
8
51
51
5
5
37
1.48
17037--17148
35
3.2
35
90
0
179
32
17
35
14
1.90
24257--24299
15
2.8
15
92
3
68
53
0
4
41
1.21
26275--26309
9
3.9
9
88
0
52
74
0
2
22
0.95
26555--26579
13
1.9
13
100
0
50
56
0
0
44
0.99
28697--28743
24
1.9
25
82
4
60
61
10
0
27
1.29
29109--29167
31
1.9
31
89
0
91
23
23
10
42
1.85
29932--30017
23
3.9
23
68
29
62
36
0
2
61
1.09
29933--30065
12
11.7
12
68
15
70
40
0
1
57
1.08
29932--30082
67
2.3
67
88
6
218
40
0
1
58
1.06
30055--30123
21
2.9
24
70
16
63
39
1
1
57
1.16
30091--30152
19
3.3
19
78
15
58
37
1
0
61
1.06
30617--30677
31
2.0
31
86
0
86
45
8
4
40
1.55
31383--31417
2
17.5
2
100
0
70
51
0
0
48
1.00
61815--61853
19
2.1
19
90
4
62
53
0
0
46
1.00
65792--65816
2
12.5
2
100
0
50
52
0
0
48
1.00
67095--67207
60
1.9
60
81
3
138
37
15
11
36
1.83
69806--69849
19
2.4
19
85
11
56
56
2
4
36
1.32
75388--75476
26
3.0
31
82
15
134
23
15
21
39
1.92
80301--80517
108
2.0
108
100
0
434
35
12
11
40
1.79
82220--82290
29
2.4
30
82
11
85
33
12
1
52
1.48
83535--83583
19
2.6
19
80
6
55
42
6
16
34
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84202--84246
23
2.0
23
86
0
63
26
26
26
20
1.99
84871--84908
20
1.9
20
88
0
58
10
31
34
23
1.89
84935--84976
21
2.0
21
85
0
57
16
26
28
28
1.97
91015--91059
23
2.0
23
86
0
63
26
26
26
20
1.99
91685--91722
20
1.9
20
88
0
58
10
31
34
23
1.89
91749--91790
21
2.0
21
85
0
57
16
26
28
28
1.97
93365--93488
32
3.9
32
90
2
196
34
20
17
27
1.95
94212--94280
30
2.3
30
82
7
77
30
15
11
42
1.83
106839--106868
15
1.9
16
93
6
53
46
3
3
46
1.35
114171--114224
17
3.1
19
79
12
53
46
3
3
46
1.38
114181--114224
17
2.5
18
88
3
63
50
2
2
45
1.27
116025--116083
18
3.3
18
95
0
100
61
8
11
18
1.55
118779--118892
36
3.1
36
87
3
147
19
37
12
30
1.88
119704--120408
33
21.4
33
75
4
488
18
15
32
33
1.92
124929--124953
12
2.1
12
100
0
50
44
16
16
24
1.86

Tables:   1

The End!