Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002575.1 Hibiscus syriacus cultivar Beakdansim tig00005219_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56315

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1186--1227
22
1.9
22
85
0
57
59
0
9
30
1.29
1263--1321
30
2.0
30
84
15
79
67
3
5
23
1.26
2283--2384
50
2.0
51
96
1
188
33
10
9
46
1.72
3065--3937
106
8.3
106
92
2
1399
22
17
25
34
1.96
3071--3937
423
2.1
416
91
2
1398
22
17
25
34
1.96
15271--15317
13
3.6
13
85
0
58
70
2
6
21
1.20
15469--15516
18
2.7
18
77
3
53
66
2
2
29
1.14
16990--17067
23
3.3
23
85
1
102
33
23
19
24
1.97
17074--17292
104
2.1
103
94
0
384
37
23
12
25
1.91
18078--18239
64
2.5
63
76
8
157
26
21
20
31
1.98
22644--22721
23
3.3
23
81
1
84
32
21
20
25
1.98
22728--22945
103
2.1
103
92
0
364
37
23
11
27
1.90
23860--23906
19
2.5
19
100
0
94
25
29
17
27
1.97
26976--27047
36
1.9
38
83
10
96
52
2
0
44
1.15
31355--31415
21
3.2
21
61
29
55
29
4
21
44
1.73
31347--31465
35
3.3
36
86
8
163
31
5
20
43
1.73
34906--35021
35
3.2
36
91
4
182
31
5
19
43
1.73
36697--36727
4
7.8
4
100
0
62
77
0
0
22
0.77
40168--40225
23
2.5
23
82
2
80
39
1
13
44
1.54
43694--43727
17
2.0
17
100
0
68
52
17
11
17
1.73
47617--47670
21
2.6
21
100
0
108
24
25
18
31
1.97
50815--50859
16
2.9
16
80
3
56
57
0
0
42
0.98

Tables:   1

The End!