Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000258.1 Hibiscus syriacus cultivar Beakdansim tig00000471_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97975

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2255--2375
49
2.4
49
84
8
149
26
20
25
27
1.99
2394--2510
50
2.4
49
84
5
157
18
32
33
15
1.92
18707--18797
24
3.9
24
95
1
141
29
15
9
45
1.78
18707--18797
47
1.9
47
88
4
139
29
15
9
45
1.78
30171--30239
32
2.1
32
84
7
86
69
1
7
21
1.21
31757--31811
29
1.9
28
85
3
74
25
7
3
63
1.37
32306--32370
24
2.9
22
76
17
62
52
1
3
43
1.26
32358--32410
23
2.3
23
81
15
65
49
1
0
49
1.12
32497--32582
27
2.9
29
83
11
104
61
1
0
37
1.04
32602--32669
31
2.2
33
86
7
97
50
2
1
45
1.26
49827--49913
38
2.3
39
90
7
144
10
11
41
36
1.75
50076--50173
38
2.4
41
83
11
132
12
12
37
37
1.80
49648--50147
249
2.0
249
95
2
894
23
12
28
36
1.90
50080--50166
37
2.4
37
92
3
140
13
11
36
37
1.81
55425--55491
19
3.4
19
78
17
66
22
1
0
76
0.87
55425--55498
40
1.9
37
86
13
105
21
1
0
77
0.85
55444--55512
33
2.3
29
82
12
77
23
2
0
73
0.96
56499--56564
19
3.5
19
71
8
55
21
7
1
69
1.21
56497--56573
39
2.0
39
82
10
95
20
6
1
71
1.16
64527--64552
4
6.5
4
100
0
52
76
0
23
0
0.78
65403--65579
41
4.3
41
80
4
205
36
16
18
28
1.93
65388--65579
81
2.4
81
80
6
226
35
16
19
28
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65677--65763
41
2.2
40
87
2
120
32
20
19
27
1.97
65677--65780
40
2.6
41
84
1
129
33
21
17
27
1.95
74554--74618
32
2.0
32
93
0
112
33
12
9
44
1.74
75867--75908
22
1.9
22
90
0
66
16
9
0
73
1.08
81464--81582
60
2.0
60
88
0
175
39
17
11
31
1.86
82085--82147
29
2.2
29
82
0
72
66
1
12
19
1.32
82205--82234
2
15.5
2
93
6
53
53
0
0
46
1.00
82243--82327
20
4.4
19
73
17
59
71
3
7
17
1.23
82280--82310
14
2.2
14
94
0
53
77
0
9
12
0.99
82313--82378
16
4.1
17
73
26
72
63
1
1
33
1.13
82355--82445
41
2.3
38
77
17
96
63
1
7
27
1.28
82472--82496
2
12.5
2
100
0
50
52
0
0
48
1.00
83910--84107
110
1.8
110
88
0
306
23
18
21
36
1.95
91816--91860
23
2.0
23
82
8
56
22
13
20
44
1.85
92225--92266
19
2.3
18
84
12
50
71
0
7
21
1.09
95639--95716
16
5.2
15
69
14
54
66
1
3
28
1.17
95742--95784
2
22.0
2
90
4
70
51
0
2
46
1.13
95660--95813
66
2.3
67
73
11
147
60
1
5
32
1.29

Tables:   1

The End!