Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002589.1 Hibiscus syriacus cultivar Beakdansim tig00005242_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34964

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85--127
3
14.3
3
100
0
86
32
0
0
67
0.91
5317--5467
59
2.5
60
86
2
205
39
13
12
35
1.82
10957--11035
24
3.5
24
67
22
73
35
11
0
53
1.37
11516--11911
201
2.0
202
85
1
533
35
21
16
27
1.94
12480--12546
3
22.0
3
90
3
53
38
7
0
53
1.29
12822--12846
13
1.9
13
100
0
50
88
0
0
12
0.53
14031--14096
16
3.9
17
75
14
57
34
1
1
62
1.14
14116--14196
13
6.4
12
71
23
60
25
1
3
69
1.13
20974--21007
17
2.0
17
88
0
50
35
11
11
41
1.78
21067--21175
33
3.4
33
91
3
170
45
14
8
31
1.74
21164--21205
21
2.0
21
90
0
66
50
7
11
30
1.66
23491--23536
12
3.6
12
81
16
56
17
19
17
45
1.85
23490--23529
15
2.9
14
85
14
57
20
17
15
47
1.83
32893--33001
46
2.4
45
81
6
130
33
19
19
28
1.96
34703--34739
18
2.1
18
100
0
74
40
16
16
27
1.89

Tables:   1

The End!