Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002591.1 Hibiscus syriacus cultivar Beakdansim tig00005244_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74471

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
391--2416
2
1042.5
2
88
6
3103
0
2
51
46
1.14
10901--10948
7
6.4
7
81
9
51
27
2
4
66
1.21
11054--11084
14
2.2
14
94
0
53
32
0
6
61
1.21
13917--13978
32
1.9
32
100
0
124
17
6
19
56
1.62
14935--15350
81
5.1
81
84
4
487
30
19
17
33
1.95
14892--15350
163
2.8
164
78
5
500
30
18
17
33
1.94
18616--18766
71
2.1
71
92
0
257
43
24
0
31
1.59
22107--22136
10
3.0
10
95
0
51
73
0
0
26
0.84
22661--22710
25
2.0
24
85
11
66
34
4
0
62
1.14
25472--25521
23
2.1
24
89
10
77
44
8
2
46
1.44
25797--25844
15
3.2
15
74
8
53
54
0
0
45
0.99
31712--31967
4
65.2
4
83
5
191
39
0
60
0
1.00
31712--31967
10
26.1
10
78
5
191
39
0
60
0
1.00
32913--32983
14
5.1
14
77
13
65
47
2
4
45
1.36
32941--33017
11
7.0
11
76
16
79
46
1
6
45
1.37
33803--33830
7
4.0
7
100
0
56
14
0
42
42
1.45
34686--34744
27
2.3
24
78
15
73
42
6
3
47
1.46
34781--34857
11
6.7
11
73
21
61
44
10
2
42
1.52
34785--34860
21
3.5
20
68
23
55
44
10
2
42
1.52
34781--34857
24
3.3
24
68
23
74
44
10
2
42
1.52
37924--37976
18
2.9
18
81
13
63
33
1
7
56
1.38
43002--43056
23
2.4
23
84
0
65
50
9
23
16
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43023--43066
20
2.0
22
83
12
56
47
13
22
15
1.81
43668--43714
18
2.6
18
90
6
60
40
4
29
25
1.75
43684--43748
17
3.8
17
93
2
103
33
9
30
26
1.88
44560--44639
36
2.2
36
82
8
92
37
37
12
12
1.81
51566--51641
31
2.4
32
80
8
84
44
0
38
17
1.49
52930--53022
30
3.1
30
93
1
152
20
21
26
31
1.98
53600--53642
21
2.0
21
82
8
52
32
4
11
51
1.59
56884--56971
46
1.9
46
81
4
106
45
6
14
32
1.72
66539--66607
32
2.2
31
87
5
95
65
24
0
10
1.24
70544--70583
21
1.9
21
94
0
71
22
25
25
27
2.00

Tables:   1

The End!