Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002594.1 Hibiscus syriacus cultivar Beakdansim tig00005250_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65239

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6608--6659
25
2.0
26
82
10
63
11
19
1
67
1.31
14366--14410
20
2.4
19
85
7
56
46
6
24
22
1.75
14549--14621
37
2.0
36
84
5
94
49
5
0
45
1.25
15523--15571
22
2.2
22
92
0
80
18
20
26
34
1.95
15960--16474
200
2.6
197
85
3
676
31
15
14
39
1.87
16916--16965
19
2.6
19
90
0
82
54
8
4
34
1.49
18515--18552
18
2.1
18
95
0
67
7
34
0
57
1.28
21286--22008
182
4.0
182
90
1
1092
27
16
13
42
1.86
21831--22171
163
2.1
164
91
0
558
27
14
12
44
1.82
21943--22320
183
2.1
184
82
7
473
28
15
11
44
1.81
21653--22394
347
2.1
346
91
1
1184
26
15
13
44
1.83
25734--25808
30
2.5
30
82
2
87
46
6
5
41
1.53
27925--27949
2
12.5
2
100
0
50
48
0
0
52
1.00
28904--28959
19
2.8
19
89
5
76
73
1
0
25
0.93
28897--28957
29
2.1
30
85
14
83
73
1
1
22
1.01
28987--29248
67
3.8
68
81
12
275
43
8
4
43
1.53
28982--29248
34
7.6
33
80
14
236
43
7
4
44
1.52
29178--29276
39
2.5
39
83
6
92
45
8
4
42
1.52
29472--29516
23
2.0
23
86
8
65
40
0
11
48
1.39
30259--30296
20
1.9
20
94
0
67
36
2
31
28
1.71
30450--30480
15
2.0
16
93
6
55
0
22
12
64
1.27
33268--33409
63
2.2
63
88
1
203
34
22
19
23
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33953--34025
18
3.9
18
82
7
101
19
20
31
28
1.97
36997--37046
20
2.5
20
72
15
50
38
2
28
32
1.68
38297--38352
18
3.1
18
71
5
58
55
0
1
42
1.10
54104--54159
2
28.0
2
92
0
94
50
3
0
46
1.19
54475--54535
23
2.7
23
92
0
104
24
27
27
19
1.99
64719--64803
23
3.7
23
69
12
75
28
22
28
21
1.99

Tables:   1

The End!