Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002597.1 Hibiscus syriacus cultivar Beakdansim tig00005254_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68156

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4860--4944
39
2.2
40
87
6
120
47
16
12
23
1.81
24233--24286
20
2.7
20
77
11
74
27
31
14
25
1.95
24294--24360
21
3.2
21
85
2
82
26
25
17
29
1.98
24331--24375
20
2.2
20
96
0
81
40
24
17
17
1.91
24503--24553
22
2.3
22
89
0
84
21
45
13
19
1.85
24773--24834
19
3.2
19
93
2
97
45
22
17
14
1.85
26992--27047
21
2.7
21
75
10
69
26
33
14
25
1.94
26995--27077
42
2.0
42
83
9
107
26
34
16
21
1.95
31905--32056
20
7.6
20
73
11
116
26
14
25
33
1.94
40898--40924
2
13.5
2
100
0
54
48
0
0
51
1.00
41210--41245
19
1.9
19
88
5
56
63
0
8
27
1.23
41456--41499
22
2.2
19
84
15
54
77
4
0
18
0.94
50726--50771
19
2.4
19
96
0
83
19
21
32
26
1.97
56481--56520
21
1.9
21
85
10
55
35
10
2
52
1.48
58437--58485
19
2.7
17
84
9
53
26
20
28
24
1.99
58457--58616
65
2.5
65
87
5
218
26
19
24
30
1.98
58457--58666
65
3.2
64
78
12
214
26
18
24
30
1.98
61767--61859
47
2.0
47
87
6
136
36
10
8
44
1.70
66937--67035
6
17.2
6
78
17
104
67
0
0
32
0.91
66958--67032
4
19.8
4
74
20
72
68
0
0
32
0.90
66946--67035
10
9.0
10
76
22
91
67
0
0
32
0.91
66934--67043
10
10.8
10
73
19
86
64
0
0
35
0.94

Tables:   1

The End!