Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002600.1 Hibiscus syriacus cultivar Beakdansim tig00005259_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67765

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3075--3132
27
2.1
27
93
0
98
41
5
6
46
1.53
5252--5279
14
2.0
14
100
0
56
21
42
28
7
1.79
5266--5319
20
2.7
19
80
2
63
27
33
25
12
1.93
5310--5364
23
2.4
23
90
0
83
27
23
32
16
1.96
5330--5410
33
2.5
33
86
7
105
28
24
37
9
1.87
5443--5526
33
2.6
33
86
1
116
8
39
26
26
1.84
5508--5540
14
2.4
14
94
0
57
6
30
39
24
1.79
5556--5631
29
2.6
29
95
0
134
11
23
44
19
1.84
16572--16647
21
3.6
21
68
25
61
31
13
26
28
1.93
17373--17418
23
2.0
23
83
8
58
52
15
0
32
1.43
28678--28710
17
1.9
17
88
11
50
75
0
0
24
0.80
30789--31009
64
3.5
62
77
7
194
33
19
19
27
1.96
36987--37019
3
10.7
3
93
6
57
0
33
0
66
0.92
37548--37768
64
3.5
64
84
2
248
33
20
18
26
1.96
38076--38111
12
3.0
12
91
0
63
33
5
25
36
1.79
38259--38287
15
1.9
15
100
0
58
17
20
27
34
1.95
45358--45480
51
2.4
52
93
1
203
13
19
26
41
1.87
45942--46001
13
4.8
13
79
8
79
68
1
0
30
0.99
45947--45997
8
6.8
8
79
20
65
66
1
0
31
1.03
45938--45997
16
3.9
16
80
12
72
68
1
0
30
0.99
45959--46012
24
2.2
24
80
0
63
66
5
0
27
1.13
53797--53823
14
1.9
14
100
0
54
44
0
11
44
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54815--54850
14
2.6
14
86
4
56
61
5
2
30
1.33
61863--61922
21
2.8
22
87
2
86
26
23
26
23
2.00

Tables:   1

The End!