Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002604.1 Hibiscus syriacus cultivar Beakdansim tig00005265_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88391

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343--383
16
2.6
16
88
3
57
65
2
0
31
1.05
348--404
23
2.6
22
88
5
80
66
3
0
29
1.08
348--404
30
2.0
28
83
13
71
66
3
0
29
1.08
348--404
7
7.9
7
75
21
55
66
3
0
29
1.08
8366--8463
21
4.7
21
77
15
105
45
28
0
25
1.53
8370--8476
42
2.5
42
82
5
119
44
29
0
25
1.54
8412--8484
35
2.1
35
85
10
96
43
27
0
28
1.55
8737--8779
14
3.3
14
78
18
56
39
0
4
55
1.20
17401--17504
45
2.3
45
86
3
138
37
20
19
23
1.94
17532--17569
20
1.9
20
94
0
67
34
18
21
26
1.96
21790--21839
14
3.9
13
73
21
52
78
2
20
0
0.86
21784--21839
19
3.1
18
82
17
71
78
1
19
0
0.84
21784--21853
11
6.0
11
70
16
52
75
2
18
2
1.05
30865--30911
21
2.2
21
100
0
94
29
19
8
42
1.80
35511--35558
21
2.3
21
96
0
87
27
18
12
41
1.86
55579--55604
11
2.4
11
100
0
52
46
0
30
23
1.53
62821--62850
6
5.0
6
100
0
60
33
0
0
66
0.92
62906--62959
15
3.5
15
83
11
74
46
0
0
53
1.00
62911--62959
17
3.0
17
91
5
75
44
0
0
55
0.99
71368--71527
65
2.5
63
86
6
214
30
24
19
26
1.98
71499--71547
19
2.6
19
84
9
57
24
28
20
26
1.99
79195--79240
19
2.4
19
96
0
83
26
32
21
19
1.97

Tables:   1

The End!