Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002607.1 Hibiscus syriacus cultivar Beakdansim tig00005270_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49424

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3320--3369
13
3.8
12
80
17
55
14
2
2
82
0.86
3330--3370
8
4.8
8
83
16
55
14
2
0
82
0.76
3581--3611
16
1.9
16
100
0
62
64
6
19
9
1.45
5219--5383
76
2.2
75
87
3
242
30
2
10
56
1.47
5341--5403
19
3.2
19
75
4
54
31
0
12
55
1.37
6024--6070
17
2.6
18
86
10
69
23
2
2
72
1.06
6577--6607
16
2.0
15
93
6
53
58
0
3
38
1.15
7278--7469
64
2.8
69
82
10
198
57
11
1
29
1.43
7333--7497
76
2.2
76
87
3
244
56
11
2
29
1.48
12625--12698
37
2.0
38
91
2
123
35
16
2
45
1.61
15815--15849
14
2.5
14
100
0
70
34
11
22
31
1.90
17914--17947
18
1.9
18
88
5
52
47
32
14
5
1.69
33531--33583
14
3.8
14
78
7
54
50
1
0
47
1.12
41303--41417
52
2.2
52
89
3
171
52
13
5
29
1.62
41363--41401
20
2.0
20
94
0
69
46
12
5
35
1.65
44065--44104
20
2.0
20
95
0
71
40
17
5
37
1.72
44054--44172
52
2.3
52
94
2
206
50
15
5
28
1.67
44118--44156
20
2.0
20
94
0
69
46
12
5
35
1.65
45325--45398
12
6.4
12
71
20
59
40
1
0
58
1.07
45333--45398
3
22.0
3
84
0
87
39
1
0
59
1.07
45329--45398
24
3.0
24
93
2
124
41
1
0
57
1.08

Tables:   1

The End!