Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002610.1 Hibiscus syriacus cultivar Beakdansim tig00005276_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86985

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7776--7840
21
3.1
22
78
10
66
47
0
7
44
1.31
11132--11199
29
2.3
30
78
12
77
30
17
7
44
1.76
12465--12514
25
2.0
25
88
7
75
32
10
22
36
1.87
21585--22558
486
2.0
486
93
1
1666
35
16
8
39
1.79
26823--26905
12
6.9
12
70
10
71
20
15
16
46
1.83
26809--26912
48
2.2
48
82
6
122
19
16
16
48
1.82
26809--26919
24
4.6
24
73
6
91
19
15
16
48
1.81
33286--33577
80
3.7
80
92
0
476
23
19
25
31
1.98
36322--36459
3
46.3
3
94
4
235
63
0
1
34
1.03
36783--37569
113
6.9
113
92
2
1279
30
19
13
37
1.90
36782--37558
338
2.3
344
92
2
1307
29
19
13
37
1.90
36783--37552
225
3.4
224
94
2
1279
30
19
13
37
1.90
38361--38856
83
6.0
83
97
0
897
36
22
14
27
1.92
39853--39906
9
6.0
9
82
8
56
1
12
0
85
0.69
39852--39904
17
3.2
17
83
5
72
1
11
0
86
0.64
39852--39903
24
2.1
25
92
3
88
1
11
0
86
0.65
52120--52161
15
2.8
15
82
7
50
0
23
2
73
0.94
52710--52818
3
36.3
3
94
0
182
62
0
3
33
1.13
56088--56115
14
2.0
14
100
0
56
42
14
0
42
1.45
66702--66766
33
2.0
33
90
3
105
27
15
7
49
1.72
86401--86438
19
2.0
20
94
5
69
26
26
28
18
1.98
86499--86542
20
2.2
20
91
0
70
52
2
6
38
1.41
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86495--86549
20
2.9
19
82
10
69
52
3
7
36
1.47

Tables:   1

The End!