Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002615.1 Hibiscus syriacus cultivar Beakdansim tig00005293_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51005

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1296--1341
23
1.9
25
91
8
78
58
8
10
21
1.58
2217--2281
32
2.0
32
87
0
94
66
3
10
20
1.36
3700--3740
3
14.0
3
85
14
59
65
0
0
34
0.93
5677--5719
21
2.0
21
81
0
50
32
0
11
55
1.36
6144--6178
18
1.9
18
88
0
52
31
2
17
48
1.61
8313--8358
8
5.9
8
78
14
51
28
0
2
69
1.00
11507--11558
26
2.0
26
84
3
68
19
1
19
59
1.47
12419--12815
83
4.8
83
84
0
465
28
21
17
32
1.96
15160--15405
49
5.0
49
93
1
411
38
15
20
25
1.92
15160--15405
99
2.5
97
90
3
402
38
15
20
25
1.92
18765--18820
21
2.7
21
74
17
55
42
0
0
57
0.99
20086--20127
18
2.2
19
84
16
52
28
4
2
64
1.26
20639--20780
76
1.9
75
86
1
203
31
15
5
47
1.69
33845--33878
16
2.1
16
88
0
50
41
17
0
41
1.50
38458--38490
15
2.2
16
89
10
52
84
0
3
12
0.72
38468--38577
45
2.4
45
76
15
120
74
1
7
16
1.12
38469--38554
44
2.0
43
84
11
113
73
2
5
18
1.15
38518--38582
31
2.1
30
83
8
78
73
1
12
12
1.16
38463--38576
44
2.6
43
76
19
110
75
1
7
15
1.10
38589--38628
21
2.0
20
85
5
53
65
5
15
15
1.44
39085--39183
29
3.3
29
78
14
94
62
1
4
32
1.20
39145--39186
3
14.0
3
80
9
50
69
0
0
30
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39135--39201
15
4.5
14
80
15
64
70
1
1
26
1.05
40334--40373
19
2.1
19
85
4
53
67
0
2
30
1.04
40363--40410
14
3.4
14
77
13
53
43
0
6
50
1.27
41081--41117
19
1.9
19
94
0
65
21
37
16
24
1.93
41067--41229
65
2.5
65
84
3
213
30
26
15
27
1.96
42572--42785
117
1.8
117
80
8
256
50
7
15
25
1.71
43316--43355
20
2.0
21
85
14
57
37
15
5
42
1.68
43315--43359
20
2.2
20
80
11
56
40
13
4
42
1.64
48221--48257
19
1.9
19
94
0
65
21
37
16
24
1.93
48207--48365
61
2.6
61
84
5
212
30
27
15
27
1.96
49358--49508
65
2.4
65
83
9
190
23
19
23
33
1.97
50351--50395
1
45.0
1
86
0
63
0
6
0
93
0.35
50353--50394
14
2.9
14
96
3
75
0
7
0
92
0.37
50351--50395
21
2.2
21
96
4
83
0
6
0
93
0.35
50432--50474
16
2.7
16
79
13
52
2
11
2
83
0.83

Tables:   1

The End!