Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002619.1 Hibiscus syriacus cultivar Beakdansim tig00005327_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54874

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5604--5640
20
1.9
19
89
10
58
45
5
24
24
1.74
5785--5864
39
2.1
39
82
13
96
51
3
1
43
1.27
13005--13049
21
2.1
21
83
4
54
51
4
15
28
1.63
33716--33748
16
2.0
17
88
5
50
54
6
9
30
1.56
39876--39916
20
2.0
20
90
0
64
24
31
34
9
1.88
40400--40720
103
3.1
103
99
0
624
25
13
24
36
1.92
40737--40799
23
2.7
23
87
4
92
20
26
26
25
1.99
41552--41709
40
3.9
41
68
8
106
30
15
22
32
1.94
41529--41806
123
2.3
123
91
1
432
31
16
21
30
1.95
42107--42144
11
3.5
11
92
3
60
10
42
0
47
1.38
44986--45017
14
2.3
14
100
0
64
15
21
18
43
1.87
45729--45928
83
2.4
85
81
5
228
24
22
20
33
1.97
45729--45928
42
4.7
43
80
10
198
24
22
20
33
1.97

Tables:   1

The End!