Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002621.1 Hibiscus syriacus cultivar Beakdansim tig00005336_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58883

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189--268
39
2.1
39
90
0
124
16
12
20
51
1.76
525--561
18
2.1
18
89
0
56
51
10
5
32
1.60
946--994
25
2.0
24
88
7
73
40
18
8
32
1.80
1190--1251
22
2.7
23
85
5
81
38
19
6
35
1.77
1180--1251
23
3.2
23
82
4
83
40
20
5
33
1.76
4043--4920
182
4.8
183
96
1
1595
33
16
14
34
1.90
4043--4920
365
2.4
363
95
1
1598
33
16
14
34
1.90
6338--6391
3
18.0
3
84
0
72
25
33
3
37
1.74
6338--6395
12
4.8
12
93
0
80
25
32
5
36
1.78
6338--6406
18
3.8
18
86
0
75
23
33
5
37
1.79
6351--6403
12
4.4
12
92
0
70
22
33
7
35
1.83
7855--9004
580
2.0
580
92
5
1911
31
16
16
36
1.91
8550--9010
199
2.3
200
96
1
863
30
16
17
35
1.92
9123--9169
19
2.6
18
90
6
69
55
10
2
31
1.46
10960--11025
33
2.0
33
84
0
87
25
46
0
27
1.53
11059--11123
21
3.1
21
80
6
69
15
29
15
40
1.88
13354--13396
20
2.3
18
85
14
61
20
16
11
51
1.75
13359--13405
20
2.4
19
82
10
67
19
17
10
53
1.72
13527--13572
20
2.3
20
89
10
76
17
17
10
54
1.70
14717--14771
2
27.5
2
100
0
110
50
0
0
49
1.00
27350--27659
157
2.0
154
97
2
586
40
14
25
20
1.90
33102--33164
34
1.9
32
87
6
90
34
19
17
28
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35304--35332
7
4.1
7
100
0
58
13
17
27
41
1.87
58238--58289
15
3.2
17
72
22
58
36
21
0
42
1.53

Tables:   1

The End!