Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002622.1 Hibiscus syriacus cultivar Beakdansim tig00005337_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50416

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7067--7456
185
2.1
185
92
2
651
45
9
3
42
1.53
13315--13359
23
2.0
23
90
0
72
26
26
24
22
2.00
13338--13641
149
2.0
149
97
0
572
35
20
14
28
1.93
18716--18761
23
2.0
23
91
0
74
28
26
23
21
1.99
18739--19042
149
2.0
149
98
0
590
35
20
15
28
1.93
19498--19637
63
2.2
63
85
2
183
26
20
20
32
1.97
22611--22637
2
13.5
2
100
0
54
51
0
0
48
1.00
26961--26993
18
1.9
17
88
11
50
15
12
0
72
1.12
31217--31270
25
2.2
25
100
0
108
27
12
29
29
1.94
32842--32879
20
1.9
20
88
0
58
28
5
5
60
1.40

Tables:   1

The End!