Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002632.1 Hibiscus syriacus cultivar Beakdansim tig00005363_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  102671

Tables:   1   

This is table  1  of  1  ( 54 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7031--7075
14
3.2
14
93
0
72
53
24
4
17
1.62
7026--7075
7
7.0
7
83
2
64
54
26
4
16
1.59
8033--8102
30
2.3
30
78
11
72
31
20
8
40
1.82
10959--11006
6
7.8
6
82
13
62
0
14
2
83
0.74
10957--11014
12
4.8
11
82
14
62
0
15
1
82
0.74
13750--13818
7
9.9
7
83
0
84
50
26
5
17
1.68
13741--13819
21
3.7
21
91
1
113
50
25
6
17
1.69
13863--13984
40
3.1
40
94
2
203
31
30
17
20
1.95
14860--14920
30
2.0
31
83
3
79
37
21
8
32
1.83
21574--21625
27
2.0
26
88
3
77
42
3
1
51
1.31
21727--21765
2
20.0
2
89
5
62
46
0
2
51
1.14
22936--23075
54
2.6
54
83
8
153
17
5
0
76
1.01
22936--23135
56
3.2
63
75
20
206
17
6
1
76
1.05
22997--23094
8
10.8
9
74
23
57
17
3
1
78
0.93
22990--23094
27
3.9
26
78
9
104
18
2
0
78
0.94
22990--23135
11
13.1
11
68
15
59
17
4
1
76
1.02
22930--23096
18
9.3
18
70
16
96
18
5
0
75
1.03
22996--23098
25
4.0
24
75
21
84
17
2
0
78
0.93
22963--23103
54
2.6
55
84
7
155
16
5
0
77
1.00
22959--23135
54
3.2
55
81
10
141
16
6
1
76
1.05
23007--23143
68
2.1
62
81
10
150
14
6
1
77
1.04
33333--33645
43
7.3
43
85
2
326
26
20
24
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33329--33645
129
2.5
128
81
5
379
27
20
24
28
1.99
33793--33851
21
2.8
21
84
0
73
55
20
5
18
1.61
36713--37094
82
4.7
83
83
4
445
30
19
19
30
1.96
36713--37113
41
9.8
40
70
15
230
31
19
19
29
1.96
44792--44871
33
2.4
33
87
0
115
36
12
15
36
1.85
51628--51664
18
2.1
18
100
0
74
32
5
27
35
1.79
56647--56838
76
2.5
77
88
2
264
20
23
32
22
1.98
59408--59447
21
1.9
21
89
0
62
10
25
40
25
1.86
59429--59491
21
2.9
21
83
4
72
15
25
38
20
1.92
63299--63338
21
1.9
21
85
10
55
35
10
2
52
1.48
64234--64285
27
2.0
26
88
3
77
40
5
1
51
1.37
65562--65606
16
2.8
16
83
12
65
26
2
2
68
1.12
65592--65649
24
2.4
24
80
5
64
20
10
0
68
1.18
65639--65708
35
2.0
36
85
2
97
24
2
1
71
1.08
65576--65762
95
1.9
100
84
10
253
21
6
1
71
1.15
65683--65732
24
2.1
24
85
7
66
22
2
0
76
0.89
65701--65744
19
2.5
17
82
10
52
11
9
0
79
0.93
73318--73362
14
3.2
14
93
0
72
53
24
4
17
1.62
73313--73362
7
7.0
7
83
2
64
54
26
4
16
1.59
77251--77324
10
7.6
10
75
17
75
1
16
1
81
0.84
77251--77314
7
9.3
7
80
10
62
0
15
1
82
0.74
77248--77316
18
3.8
18
84
9
95
0
17
1
81
0.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80050--80118
7
9.9
7
83
0
84
50
26
5
17
1.68
80041--80119
21
3.7
21
91
1
113
50
25
6
17
1.69
80176--80284
40
2.7
40
95
0
191
33
30
15
20
1.94
89331--89438
8
12.2
8
69
22
51
18
3
0
76
0.98
89325--89375
18
2.7
19
84
6
68
23
0
0
76
0.79
89279--89417
18
8.2
16
69
19
61
18
5
0
75
1.03
89290--89428
54
2.6
55
83
10
171
19
5
0
74
1.04
89354--89433
25
3.1
24
79
20
83
16
3
1
78
0.95
89344--89432
46
1.9
46
84
8
119
17
3
1
77
0.97
89342--89478
68
2.1
62
81
8
148
16
6
1
75
1.07

Tables:   1

The End!