Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000264.1 Hibiscus syriacus cultivar Beakdansim tig00000487_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70133

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1067--1218
80
1.9
81
81
9
186
40
3
11
45
1.56
1979--2057
35
2.3
33
77
8
86
46
21
0
31
1.51
6066--6133
35
1.9
35
91
5
111
29
0
23
47
1.52
8228--8269
20
2.2
20
91
8
70
26
21
4
47
1.70
8407--8855
109
4.1
111
91
3
626
44
15
14
25
1.84
9134--13184
4
1043.5
4
89
7
6052
25
1
25
47
1.61
14385--14419
12
2.8
12
91
4
52
0
11
2
85
0.69
14390--14452
14
4.4
14
73
21
51
1
17
6
74
1.10
14406--14479
22
3.2
23
76
16
73
4
17
6
71
1.24
15068--15124
20
2.8
20
89
0
78
38
17
17
26
1.92
18083--18116
14
2.5
13
90
9
59
52
20
0
26
1.46
19836--19890
3
19.0
3
79
7
60
61
3
1
32
1.24
19830--19879
15
3.4
15
81
10
59
58
4
2
36
1.29
20374--20456
3
27.0
3
80
4
85
39
2
0
57
1.12
20370--20444
25
2.9
25
82
6
87
38
1
0
60
1.06
20363--20459
9
10.9
9
74
13
76
40
2
0
57
1.10
20473--20502
13
2.3
13
100
0
60
30
50
13
6
1.67
22086--22119
17
2.0
17
100
0
68
41
0
0
58
0.98
24403--24769
179
2.0
181
95
4
663
40
18
17
22
1.91
33419--33451
17
1.9
17
88
11
50
81
0
18
0
0.68
33782--33827
16
2.6
18
87
12
69
32
8
4
54
1.51
33782--33827
19
2.6
17
90
10
67
32
8
4
54
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34494--35045
82
6.7
84
95
1
922
26
13
21
37
1.92
35772--36892
113
9.8
113
92
3
1761
39
15
17
26
1.90
37156--37235
3
26.0
3
79
5
79
40
2
0
57
1.12
37172--37236
19
3.5
19
80
4
69
43
3
0
53
1.16
38856--38890
17
2.0
18
94
5
63
40
0
2
57
1.14
44020--44060
21
2.0
21
100
0
82
48
36
4
9
1.58
44584--44867
142
2.0
142
99
0
559
29
14
26
29
1.95
55378--55427
19
2.6
19
90
3
82
38
26
10
26
1.87
60741--60765
12
2.1
12
100
0
50
20
16
40
24
1.91
62632--62703
23
3.4
21
79
9
83
31
22
16
29
1.96
63758--63787
15
2.0
15
100
0
60
26
6
26
40
1.81
64922--64980
25
2.4
25
100
0
118
47
8
3
40
1.51
64922--64981
12
4.8
13
79
8
70
48
8
3
40
1.50
66541--66701
83
2.0
81
88
2
241
43
11
3
42
1.56

Tables:   1

The End!