Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002641.1 Hibiscus syriacus cultivar Beakdansim tig00005386_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51517

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
360--404
21
2.2
22
88
11
69
77
4
11
6
1.09
5383--5650
42
6.2
43
85
7
339
22
19
19
38
1.94
22132--22339
80
2.6
79
89
1
299
22
21
27
28
1.99
25734--25777
22
2.0
22
90
0
70
25
9
13
52
1.70
25819--25848
14
2.1
14
93
0
51
20
6
3
70
1.25
25890--25940
26
2.0
26
84
0
66
7
9
21
60
1.53
26285--26388
37
2.8
37
86
0
136
42
13
13
30
1.83
26807--26855
22
2.2
23
85
10
66
24
2
0
73
0.94
26912--26961
21
2.3
21
79
3
55
20
6
4
70
1.25
26781--27025
104
2.4
99
79
10
217
26
4
3
65
1.28
26998--27122
54
2.3
53
76
15
119
28
3
3
64
1.24
27080--27154
28
2.7
27
76
15
71
33
2
1
62
1.17
27055--27177
49
2.4
48
77
17
124
31
4
0
62
1.22
27271--27326
19
2.9
19
74
10
60
21
8
1
67
1.27
27374--27413
21
1.9
21
84
0
53
25
7
0
67
1.16
31699--31784
19
4.8
17
75
23
70
80
6
11
1
0.96
31703--31786
24
3.5
22
73
17
69
80
5
11
1
0.93
31705--31772
36
1.9
34
88
5
100
80
5
13
0
0.87
31734--31786
20
2.7
19
82
11
63
81
5
11
1
0.94
31704--31783
20
4.2
20
77
13
62
80
6
12
1
0.96
31711--31786
13
5.5
13
75
16
64
80
6
11
1
0.96
31711--31787
7
11.0
7
75
10
59
79
6
12
1
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31699--31786
16
6.1
14
71
20
58
80
6
11
1
0.94
32400--32475
22
3.5
22
92
0
125
40
26
11
21
1.87
32667--32729
24
2.6
24
84
2
90
36
19
3
41
1.67
33309--34367
106
10.0
106
92
0
1715
34
25
17
21
1.96
35124--35221
37
2.6
37
86
0
124
41
13
13
31
1.82
35242--35276
13
2.7
13
100
0
70
31
20
8
40
1.82
35709--35776
19
3.7
18
73
15
59
27
2
1
67
1.13
35709--35753
11
4.4
11
72
16
51
33
2
0
64
1.06
35749--35789
18
2.4
17
84
8
57
17
4
4
73
1.19
35749--35790
17
2.4
18
88
4
59
19
4
4
71
1.22
35954--35984
2
15.5
2
93
0
53
45
0
0
54
0.99
35956--36014
17
3.5
17
77
11
50
35
1
0
62
1.05
35987--36036
22
2.3
22
83
13
59
24
4
4
68
1.24
36113--36168
19
2.9
19
74
10
60
21
8
1
67
1.27
43282--43321
19
2.0
21
85
9
57
42
17
5
35
1.71
43818--44099
45
6.3
45
89
2
424
23
21
11
43
1.85
43818--44099
134
2.1
135
89
1
431
23
21
11
43
1.85

Tables:   1

The End!