Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002642.1 Hibiscus syriacus cultivar Beakdansim tig00005388_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54830

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3580--3673
42
2.2
42
86
3
127
23
18
26
31
1.97
3607--3674
21
3.2
20
77
4
73
22
17
26
33
1.96
6362--6411
24
2.1
24
100
0
100
50
16
0
34
1.45
11320--11370
21
2.4
21
93
0
84
35
19
13
31
1.91
22754--22833
37
2.2
37
97
0
151
57
5
21
16
1.58
31362--31484
39
3.1
40
81
3
160
30
26
19
23
1.98
34668--34701
11
3.0
11
87
8
50
23
2
2
70
1.15
35093--35191
20
4.9
20
87
8
139
37
9
26
27
1.86
35349--35423
38
2.0
37
85
10
100
49
4
1
45
1.29
37992--38316
49
6.6
49
87
3
395
34
12
21
31
1.91
37992--38316
146
2.2
146
85
3
420
34
12
21
31
1.91
40996--41043
17
2.7
18
80
6
53
75
2
2
20
1.02
41623--41742
63
1.9
62
86
5
170
55
13
0
31
1.39
41723--41783
31
2.0
31
87
12
90
60
9
0
29
1.29
41666--41805
74
1.9
74
86
2
201
56
11
0
32
1.35
41642--41838
75
2.6
74
80
8
200
55
11
1
32
1.42
43661--43710
12
4.2
12
75
17
50
74
8
6
12
1.22
49098--49126
12
2.3
13
94
5
51
75
0
0
24
0.80
49696--49820
61
2.0
63
85
10
170
52
14
0
32
1.47
50707--50737
15
2.1
14
94
5
53
51
0
29
19
1.47
51094--51140
17
2.8
17
90
6
69
46
0
19
34
1.50
51462--51765
48
6.3
48
82
6
321
35
13
21
28
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51462--51765
97
3.2
95
81
7
337
35
13
21
28
1.92
54572--54622
26
2.0
25
96
3
93
21
11
23
43
1.85

Tables:   1

The End!