Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002654.1 Hibiscus syriacus cultivar Beakdansim tig00005428_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61309

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15894--15966
26
2.8
26
74
10
78
41
12
1
45
1.50
15977--16037
32
1.9
32
96
0
113
37
18
11
32
1.86
16449--16587
71
2.0
71
89
0
215
42
16
18
22
1.89
18787--18841
22
2.5
22
75
0
56
29
9
23
38
1.85
24375--24418
5
8.8
5
92
0
52
6
40
36
15
1.74
24416--24476
6
10.2
6
96
0
95
4
16
49
29
1.66
24751--24805
22
2.5
22
75
0
56
29
9
23
38
1.85
25793--25854
18
3.2
20
78
19
62
61
0
1
37
1.06
25819--26004
64
3.0
59
85
12
157
56
1
0
40
1.13
25849--26008
64
2.6
64
90
8
260
57
1
0
40
1.09
25870--25953
40
2.2
37
87
10
116
54
1
0
44
1.07
25904--25978
24
3.0
26
83
14
95
54
1
0
44
1.08
25982--26014
17
1.9
17
93
0
57
66
3
0
30
1.06
29514--29568
26
2.1
26
100
0
110
41
3
43
10
1.57
40763--40796
12
2.8
12
100
0
68
44
8
23
23
1.81
47837--47878
19
2.2
19
87
8
59
33
7
19
40
1.78
52397--52444
22
2.2
22
84
0
60
31
12
16
39
1.86
60538--60649
24
4.7
24
69
12
77
44
16
12
25
1.83

Tables:   1

The End!