Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002655.1 Hibiscus syriacus cultivar Beakdansim tig00005429_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49645

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10931--11035
37
2.8
37
86
0
147
40
15
14
29
1.86
11486--11521
18
1.9
19
88
5
56
38
5
0
55
1.23
11486--11581
23
4.3
23
68
24
62
33
4
2
60
1.27
11781--11816
18
1.9
19
88
5
56
30
5
0
63
1.17
16280--16348
7
9.1
8
76
20
51
79
4
15
0
0.88
16280--16370
19
4.9
17
75
20
60
79
5
14
1
0.97
16296--16356
31
2.0
31
87
6
88
78
4
16
0
0.91
16280--16357
27
3.0
26
74
20
74
79
5
15
0
0.90
16286--16348
18
3.6
16
81
12
63
80
3
15
0
0.83
16286--16371
26
3.3
24
75
16
66
79
4
15
1
0.96
28167--28200
17
2.1
16
88
5
50
14
8
0
76
1.01
29190--29225
18
2.0
18
94
0
63
19
5
27
47
1.72
29738--31003
106
12.0
106
90
1
1926
33
24
19
23
1.97
29738--31003
317
4.0
317
93
1
2008
33
24
19
23
1.97
29738--30960
633
1.9
632
91
0
2016
33
24
19
23
1.97
31702--31798
37
2.6
37
86
0
140
41
16
10
31
1.82
32331--32391
23
2.8
22
78
11
63
32
3
0
63
1.10
32331--32369
20
2.0
19
85
5
51
30
2
0
66
1.05
32331--32371
21
2.0
20
86
13
57
31
2
0
65
1.05
32648--32672
2
12.5
2
100
0
50
48
0
0
52
1.00
33126--33150
13
1.9
13
100
0
50
0
24
56
20
1.43
37300--37348
25
2.0
25
100
0
98
40
18
16
24
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42155--42252
28
3.3
29
77
16
94
33
6
13
46
1.67
42528--42568
18
2.2
19
86
8
57
39
4
0
56
1.21
47444--47476
15
2.2
15
100
0
66
48
12
6
33
1.65

Tables:   1

The End!