Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002657.1 Hibiscus syriacus cultivar Beakdansim tig00005434_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49086

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2711--2750
21
1.9
21
85
10
55
35
10
2
52
1.48
11862--11917
25
2.2
25
96
0
103
42
14
3
39
1.63
20073--20166
22
4.3
22
86
2
111
37
25
15
21
1.93
20073--20166
44
2.1
44
86
7
129
37
25
15
21
1.93
20535--20579
18
2.3
21
78
17
53
26
24
17
31
1.97
21719--22372
43
15.2
43
73
9
451
25
18
6
49
1.72
22037--22330
85
3.4
84
81
7
256
25
18
5
51
1.67
24316--24364
22
2.1
22
81
7
53
57
2
2
38
1.22
25762--25856
3
32.7
3
85
6
133
65
0
1
33
1.00
26001--26638
114
5.5
114
94
3
1057
28
20
15
35
1.93
26001--26638
227
2.8
227
92
5
1055
28
20
15
35
1.93
27275--27742
52
9.0
52
93
2
807
38
22
14
24
1.92
28899--28968
17
4.1
17
78
10
72
0
20
0
80
0.72
28883--28965
35
2.3
36
78
12
91
2
19
0
78
0.86
28901--28969
20
3.2
22
80
17
83
0
21
0
78
0.76
28907--28972
16
4.4
14
75
22
53
0
21
0
78
0.75
28931--28972
12
3.7
12
78
12
52
0
21
0
78
0.75
28907--28971
31
2.1
29
83
13
78
0
20
0
80
0.72
40327--40375
22
2.1
22
81
7
53
57
2
2
38
1.22
41779--41878
3
33.7
3
89
2
157
65
0
1
34
1.00
46255--46557
152
2.0
154
98
1
583
18
12
18
51
1.76

Tables:   1

The End!